Batch process script
File open후 align하기
alignto scn1ab4_v1_uniprot_seed-302_sample-3_model
cmd.center("scn1ab4_v1_uniprot_seed-302_sample-3_model",animate=-1)
기본 scene 설정 및 저장
bg_color black
set grid_mode, 0
scene 001_start, store
bg_color white
scene 002_BG_W, store
set grid_mode, 1
scene 003_Grid1, store
spectrum b, red_white_blue, minimum=60, maximum=95
scene 004_B_factor, store
select SCNA, chain A
select b1, chain B
select b2, chain C
select b3, chain D
select b4, chain E
util.chainbow SCNA
color blue, b1
color red, b2
color cyan, b3
color orange, b4
scene 005_subunit, store
spectrum b, red_white_blue, minimum=60, maximum=95
turn y, 180
scene 006_Lateral_back, store
turn y, 180
scene 007_Lateral, store
turn x, 90
scene 008_Top, store
save filename.pse
Hydrophobic residues만 sphere로 보이게 하기
select hydrophobic_residues, resn LEU+ILE+VAL+PHE+TRP+MET+ALA+TYR
set sphere_scale, 0.3, hydrophobic_residues
show sticks
show spheres, hydrophobic_residues